All I Wanna Do was taken down at the request of "The Harry Fox Agency, Inc. (HFA)" but Pet Sounds is on there in its entirety.
youtube is full of scrub companies with bullsh*t agenda
Harry Fox is actually the royalty collection agency to which publishing fees from recordings have to be paid in the US. If YouTube wasn't paying the royalties then Harry Fox have a perfect right to ask for the song to be removed.